[Biopython] is there an updated tutorial on how to use the Wrappers for the new NCBI BLAST+ tools?

Matthew Strand stran104 at chapman.edu
Sat Jan 2 14:16:08 EST 2010


Shoot, I replied to the wrong thread. Ignore that response, it was supposed
to go to a PSI-BLAST question. Sorry.

On Sat, Jan 2, 2010 at 11:14 AM, Matthew Strand <stran104 at chapman.edu>wrote:

> I'm no expert here but unfortunately you'll probably have to build your own
> database to do that. It's not biopython's fault since it just wraps
> PSI-BLAST and as far as I know PSI-BLAST is only made to search against one
> database. Perhaps someone else will have a different solution.
>
>
> On Sat, Jan 2, 2010 at 2:44 AM, Kevin Lam <aboulia at gmail.com> wrote:
>
>> Hi all
>> finally found
>> biopython Wrappers for the new NCBI BLAST+ tools in Applications.py
>>
>> the question is do I still use NCBIstandalone to use with BLAST+ ?
>>
>> is there a new tutorial for this?
>>
>>
>> Cheers
>> Kevin
>> _______________________________________________
>> Biopython mailing list  -  Biopython at lists.open-bio.org
>> http://lists.open-bio.org/mailman/listinfo/biopython
>>
>
>
>
> --
> Matthew Strand
>  stran104 at chapman.edu
>  phone: (626) 524-4449
>  skype: matstrand
>



-- 
Matthew Strand
 stran104 at chapman.edu
 phone: (626) 524-4449
 skype: matstrand


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