[Biopython] some help required regarding Gene

Sameet Mehta msameet at gmail.com
Wed Feb 24 18:18:21 UTC 2010


Dear all,

I recently did some SOLiD analysis recently for a ChIP-seq experiment.
 I have done some PEAK finding with MACS.  Now I want to do some more
statistics.  Is there any simple way of finding the two nearest genes
on each side of each location?  I have the location of the peaks as a
BED format file.

Sameet

-- 
Sameet Mehta, Ph.D.,
Research Associate,
Chromatin Biology Laboratory,
National Centre for Cell Science,
NCCS Complex,
University of Pune Campus,
Pune 411007

Phone: +91-20-25708158
Other Email: sameet at nccs.res.in



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