[Biopython] Writting fasta file
xyz
mitlox at op.pl
Wed Aug 25 07:22:24 EDT 2010
Hello,
the following code saves a multiple fasta file in a list and after
reverse complement it writes the content back in a fasta file.
in_handle = open(opts.inputFasta, "r")
records = list(SeqIO.parse(in_handle, "fasta"))
for record in records:
record.seq = record.seq.reverse_complement()
out_handle = open(opts.outputFasta, "w")
SeqIO.write(records, out_handle, "fasta")
How is it possible to do it without a list?
Thank you in advance.
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