[Biopython] Biopython on Jython

[Kyle Ellrott]

> >> You probably noticed I merged some of your fixes to get (the non C and
> >> non NumPy bits of) Biopython to work on Jython, but not all. Could you
> >> update your github branch to the trunk at some point? That would help
> >> in picking up more of your fixes.
> >
> > I've tried to keep my branch up to speed with the mainline.  But I didn't
> > branch my work from master, so it may harder to extract...
>
> True, but I can probably manage.
>


I just rebased my jython related work into a seperate fork.  So it should be
easier to pull out patches now.  I think there is still some work in
Bio/Data/CodonTable.py, Bio/SubsMat/MatrixInfo.py and some of the unit tests
that should make jython work a bit better.

Kyle