[Biopython] GSoC 2009/Matzke: BioGeographical Phylogenetics for Biopython

[Nick Matzke]

Hi all,

I have been on the biopython list for some time, but as I am starting a 
Google Summer of Code project (hosted by NESCENT Phyloinformatics Summer 
of Code) involving this, I felt like I should introduce myself.  Below 
are links to my set up/ grant proposal / project plan.

I am open to comments/suggestions via email or the list.  Cheers!
Nick

==============
Links:

PhyloSoc Summer of Code 2009 summary:
https://www.nescent.org/wg_phyloinformatics/Phyloinformatics_Summer_of_Code_2009#Biogeographical_Phylogenetics_for_BioPython

Bio page:
https://www.nescent.org/wg_phyloinformatics/User:Matzke


BioPython wiki summary:
http://biopython.org/wiki/Active_projects#Biogeography_.28GSoC.29

BioPython wiki work page, work plan:
http://biopython.org/wiki/BioGeography

Code repository (suggestions welcome from Brad et al. on the best way to 
do this):
http://github.com/nmatzke/biopython/tree/master

Comments welcome!  I believe there is additional stuff to do, I will get 
on it tomorrow.

Cheers!
Nick








-- 
====================================================
Nicholas J. Matzke
Ph.D. Candidate, Graduate Student Researcher
Huelsenbeck Lab
Center for Theoretical Evolutionary Genomics
4151 VLSB (Valley Life Sciences Building)
Department of Integrative Biology
University of California, Berkeley

Lab websites:
http://ib.berkeley.edu/people/lab_detail.php?lab=54
http://fisher.berkeley.edu/cteg/hlab.html
Dept. personal page: 
http://ib.berkeley.edu/people/students/person_detail.php?person=370
Lab personal page: http://fisher.berkeley.edu/cteg/members/matzke.html
Lab phone: 510-643-6299
Dept. fax: 510-643-6264
Cell phone: 510-301-0179
Email: matzke at berkeley.edu

Mailing address:
Department of Integrative Biology
3060 VLSB #3140
Berkeley, CA 94720-3140

-----------------------------------------------------
"[W]hen people thought the earth was flat, they were wrong. When people 
thought the earth was spherical, they were wrong. But if you think that 
thinking the earth is spherical is just as wrong as thinking the earth 
is flat, then your view is wronger than both of them put together."

Isaac Asimov (1989). "The Relativity of Wrong." The Skeptical Inquirer, 
14(1), 35-44. Fall 1989.
http://chem.tufts.edu/AnswersInScience/RelativityofWrong.htm
====================================================