[Biopython] blastall several alignment viewings options

[Peter]

On Fri, Jul 31, 2009 at 9:27 AM, Stefanie Lück<lueck at ipk-gatersleben.de> wrote:
> Hello!
>
> is there a way to set 2 or more alignment viewing options in one blast run?
> I would like to get the xml and the Query-anchored (and maybe some other)
> but to run Blast twice would be kind of stupid and slowing down.

I don't think there is. The XML file should contain enough data to recreate
some of the other views (if I recall correctly Sebastian Bassi has a script to
do that). However, that may not be possible for the Query-anchored output.

Peter