[BioPython] do_alignment

[Peter]

On Fri, Jan 9, 2009 at 2:22 PM, Seda Alper wrote:
>
> Dear Peter,
>
> I've executed my code at the end! I only changed the file name( from
> opuntia.fasta to my file  mouse.fasta). I think the problem may be
> resulted from the file opuntia. Now, everything works.
>
> Thanks for your help!
> Seda

Oh good, I was going to say double check that opuntia.fasta was in the
current directory.

Your other message where you got the error "ValueError: No records
found in handle" is usually caused by an empty output alignment file.
Perhaps an aborted ClustalW run had left behind an empty output file?

Peter