[BioPython] Does anyone use EZRetrieve?

Bruce Southey bsouthey at gmail.com
Wed Feb 4 17:41:20 UTC 2009


Peter wrote:
>> Hi,
>> I got nothing back from this nor for Bio.Affy and Bio.NMR (I tried a couple
>> of emails) so I would suggest you also mark these as depreciated for
>> Biopython 1.5.
>>     
>
> I'm being pedantic/nit-picking, but the next release will be Biopython
> 1.50, (one, fifty) and then Biopython 1.51 (one, fifty one).  There
> never was a Biopython 1.5 (one, five).
>
>   
Thanks as it is critical to get the numbers right! Perhaps I am missing 
a Bio.__version__ (but interesting history of numbering) .
>> The EZRetrieve help page still refers to 2003 releases.
>> http://siriusb.umdnj.edu:18080/EZRetrieve/help.jsp
>>     
>
> Anyway - maybe you are right, and we could deprecate Bio.EZRetrieve in
> Biopython 1.50 (rather than just declaring it obsolete with the
> intension of deprecating it in Biopython 1.51).
>
> Peter
>   
I know we have had this discussion before but either option is agreeable 
to me for these modules.

Bruce



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