[Biopython] Is there any in silico PCR tool on biopython?

Peter biopython at maubp.freeserve.co.uk
Wed Dec 16 17:08:00 UTC 2009


On Wed, Dec 16, 2009 at 4:57 PM, Carlos Javier Borroto
<carlos.borroto at gmail.com> wrote:
> Hi there,
>
> I'm looking for a way to show some information on the specificity of
> sets of primers I'm designing, I'll love to have a way to run an in
> silico PCR reaction and parse the results with biopython.
>
> Is there something to use with one of the available PCR simulation tools?
>

I know people use Biopython with primer3 (usually the EMBOSS
wrapped version, eprimer3).

Peter



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