[Biopython] Biogeography module

bar tomas bartomas at gmail.com
Tue Aug 18 10:40:18 UTC 2009


Hi,

I’ve been looking at the Biogeography module  (
http://biopython.org/wiki/BioGeography) currently under development. It
seems incredibly interesting and useful.

The thing that would be really useful in the tutorial would be to show a
step by step example of the commands to execute during a complete workflow
of the module, from the retrieval of gbif records to the calculation of
statistics of phylogenetic trees per region and generation of
kml/shapefiles. In the current state of the tutorial it is hard to know how
the data fed into the calculation of a tree summary object can be generated.

Congratulations for great work on this module. Look forward to using it.

All the best,

Tomas Bar




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