[BioPython] More string methods for the Seq object

[Peter]

On Fri, Sep 26, 2008 at 5:54 PM, Martin MOKREJŠ
<mmokrejs at ribosome.natur.cuni.cz> wrote:
> Hi Peter,
>  thanks for explanation, now I got your point.

Good.

>
> With 'quality checks' I meant test for compliance of the sequence
> with say IUPAC definitions. OK, it is irrelevant now.
>

I did wonder if this is what you meant.  Checking Seq objects for
compliance with the stated (IUPAC) alphabets is a separate issue -
which I have been thinking about.  I've just filed Bug 2597 so we
don't forget about it.
http://bugzilla.open-bio.org/show_bug.cgi?id=2597

>
> As long you document these functions I am fine with that. ;-)
>

Sure.  The suggested code for these new Seq object methods includes
docstrings, but I would also intend to show how they might be used in
the tutorial (probably examples like the ones shown in this email
discussion).

Peter