[BioPython] calculate F-Statistics from SNP data

[Giovanni Marco Dall'Olio]

On Thu, Oct 16, 2008 at 4:14 PM, Tiago Antão <tiagoantao at gmail.com> wrote:

> Just a minor point: I am so used to work in Fst that I mentally
> converted your "F-statistics" to Fst. Most of my mail still stands.
> The only point that changes a bit is that I only have code for Fst, so
> I cannot help you with any other.
>
> On Thu, Oct 16, 2008 at 3:10 PM, Tiago Antão <tiagoantao at gmail.com> wrote:
>
> > 3. That being said, I have code to estimate Fst (Cockerham and Wier
> > theta and a variation from Mark Beaumont) in Python. I can give it to
> > you (but is not much tested).
> >
>


Thank you.. Can you please send me this code that you are using to calculate
Fst statistics with python?
I can't guarantee I will use it (most of the people here use perl and
bioperl, but I would prefer python), but maybe I can help you testing it.


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> --
> "Data always beats theories. 'Look at data three times and then come
> to a conclusion,' versus 'coming to a conclusion and searching for
> some data.' The former will win every time."
> —Matthew Simmons,
> http://www.tiago.org
>
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