[BioPython] -->Problem using Bio.PDB "Dice"
Florian Koelling
florian.koelling at tu-bs.de
Wed Mar 12 12:23:57 UTC 2008
Hi Folks!
I tried to grab the following line from a pdb file - (in order to
create a new one) using "dice"
HETATM 3427 O11 GNF 1001 36.457 27.002 14.788 1.00
27.60 O
The code i tried:
from Bio.PDB import*
parser = PDBParser()
structure =parser.get_structure('s','2F1G.pdb')
y = extract(structure ," ", 1001, 1001 ,'2out.pdb')
I only receive an empty file.
Is there any possibility to use dice when a chain specification is
obviously missing?
Thanx alot!
Florian
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