[BioPython] Entrez

[Michiel de Hoon]

Bio.Entrez was reintroduced in release 1.45 already (though without the parser), so binbin should be able to find it.

--Michiel.

--- On Thu, 6/26/08, Peter <biopython at maubp.freeserve.co.uk> wrote:
From: Peter <biopython at maubp.freeserve.co.uk>
Subject: Re: [BioPython] Entrez
To: "binbin" <binbin.liu at umb.no>
Cc: biopython at biopython.org
Date: Thursday, June 26, 2008, 11:57 AM

On Thu, Jun 26, 2008 at 4:35 PM, binbin <binbin.liu at umb.no> wrote:
> Hei,
>        Am using biopython 1.45
>
>        my problem is as follow
>
>
>        >>> from Bio import GenBank
>        >>> from Bio import Entrez
>        Traceback (most recent call last):
>          File "<stdin>", line 1, in <module>
>        ImportError: cannot import name Entrez
>
>        I could not import Entrez. was it deleted from Bio?

Hello binbin,

A long long time ago there was a Bio.Entrez module which was deleted in 2000.

We are going to re-introduce a Bio.Entrez module in Biopython 1.46
(hopefully out next month?), which will replace Bio.WWW.NCBI.  If you
want to try this out now, please install the latest CVS version of
Biopython from source.

Can I ask why are you trying to do "from Bio import Entrez"?

Peter
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