[BioPython] Blastp XML mailfunction
Joost van Dieten
jdieten at gmail.com
Tue Jun 24 10:58:23 UTC 2008
MY CODE:
result_handle = NCBIWWW.qblast('blastp', 'swissprot', sequence,
entrez_query='man[ORGN]')
blast_results = result_handle.read()
print result_handle-
result_handler = cStringIO.StringIO(blast_results)
print result_handler
blast_records = NCBIXML.parse(result_handler)
blast_record = blast_records.next()
This code doesn't seem to work anymore. I got an error that my blast_record
is empty, but it worked fine 3 weeks ago. Something changed to the NCBIXML
code??? Any ideas??
Greetz,
Joost Dieten
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