[BioPython] blastn parameters

Stefanie Lück lueck at ipk-gatersleben.de
Wed Apr 23 12:49:50 UTC 2008


Hello!

 

Does anyone knows whether the parameters of NCBI's online blastn (http://www.ncbi.nlm.nih.gov/blast/Blast.cgi?PAGE=Nucleotides&PROGRAM=blastn&MEGABLAST=on&BLAST_PROGRAMS=megaBlast&PAGE_TYPE=BlastSearch&SHOW_DEFAULTS=on)

are the same, when I use blastall for a local blastn (without to change anything)?

On the homepage I couldn't find the parameters.

Thanks for help!



Stefanie




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