[BioPython] Retrieving the raw sequence from sequence object...
Joydeep Mitra
snakepit.rattlesnakes at gmail.com
Mon Mar 12 09:59:25 UTC 2007
Hi,
I'm a student of bioinformatics (coming from a biological background).
I've just started using biopython for parsing biological file formats.
The Bio.Fasta module contains the fasta iterator object, which spits out
sequence objects...of the form:
Seq('CGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGTTGAGATCACATAATAAT ...',
IUPACAmbiguousDNA())
I want to retrieve the sequence in it's entirety and in raw format....how
does one do that using an instance object?
I've tried a few things without success...will be glad if some1 could show
me how...
Thanking in advance,
Joy
More information about the Biopython
mailing list