[BioPython] Problem with blastx output parsing =~

Peter biopython at maubp.freeserve.co.uk
Mon Jun 4 17:41:38 UTC 2007


Italo Maia wrote:
> Well, i have 24 thousand of those, i think it would be very painfull to
> remake them...

That is a good reason not to re-run blast!

 > i'll fill the the bug, but, could there be a workaround?

If you haven't filled a new bug already, you could attach the file to 
bug 2090 which is similar:

http://bugzilla.open-bio.org/show_bug.cgi?id=2090

You could try that patch - it might help.

I would have tested your example on my setup, but the line wrapping had 
been messed up.

Peter




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