[BioPython] OBO format parser and genome databasing

[Sean Davis]

Peter wrote:
> Sean Davis wrote:
>> Does anyone know of an OBO format parser for python?
> 
> This is the replacement for the older GO flat file format, right?

One of them, yes.

http://www.geneontology.org/GO.format.obo-1_2.shtml

>> As a more general question, is anyone using the chado database schema
>> with python?
> 
> I haven't.
> 
>> Is there a similar project to chado/gmod but python-based?  How about
>> a microarray (MAGE-type) database system that is python-based?
> 
> Sorry Sean, I don't know of such a project.

Thanks, Peter.

Sean