[BioPython] Swissprot bug
Peter
biopython at maubp.freeserve.co.uk
Mon Jan 15 13:16:03 UTC 2007
Kristian Rother wrote:
>
> I ran the most recent SProt.py from bugzilla on the 1.42 Debian
> Biopython release. It parsed all Swiss-Prot entries in last friday's
> uniprot_sprot.dat successfully (except the DT lines).
>
>> P.S. We do still need to handle new style DT lines more gracefully,
>> http://bugzilla.open-bio.org/show_bug.cgi?id=1956
>
> Added some lines of code for this, too. Test ran smoothly there, too
> (see bugzilla).
I saw the bugzilla emails first - and I have updated CVS using your code.
I had been hesitant about simply re-using the old record properties
given the meaning of the DT line information had changed slightly - but
in the absence of any other suggestions this will do. If anyone
objects, speak up now ;)
Thank you
Peter
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