[BioPython] Fwd: Biopython - SwissProt

[Peter (BioPython List)]

Jeffrey Chang wrote:
> I am forwarding your email and code to the biopython mailing list in
> case someone else has more to add, or can integrate your changes.

Thank you Jeff & Kristian,

Some similar changes have been made in BioPython which should have fixed 
the ID and RX lines.

However, I have updated CVS to include support for Line type OH 
(Organism Host) for viral hosts based on Kristian's code.  I have 
checked the unit test passes, and verified the code does work on one 
viral example, http://www.expasy.org/uniprot/P18522.txt

This properly closes bug 2043 (RX and OH lines are broken)
http://bugzilla.open-bio.org/show_bug.cgi?id=2043

If you could try the latest version of the SwissProt parser on your 
system please Kristian, that would be very useful.

Thank you

Peter

P.S. We do still need to handle new style DT lines more gracefully,
http://bugzilla.open-bio.org/show_bug.cgi?id=1956