[BioPython] Problems with Win Release for Python 2.5: Numeric, KDTree
Michiel Jan Laurens de Hoon
mdehoon at c2b2.columbia.edu
Tue Nov 28 16:24:15 UTC 2006
Hendrik Weisser wrote:
> 1. issue:
> BioPython requires the package Numeric, which is no longer supported and -
> what's worse - *not available* for Python 2.5.
> I could fix this by manually changing the code to import numpy instead, so
> that "from Bio.PDB import *" would work. But I don't think it's a good idea
> to put an installer for use with Python 2.5 on the website, if the
> requirements cannot be met directly...
>
As a temporary solution, I've put a Windows installer for Numeric for
Python 2.5 on the Biopython website. See the download page under
Required Software.
--Michiel.
--
Michiel de Hoon
Center for Computational Biology and Bioinformatics
Columbia University
1130 St Nicholas Avenue
New York, NY 10032
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