[BioPython] Running Blast locally

Muthuraman, Manickam manickam.muthuraman at wur.nl
Fri Jun 16 14:27:00 UTC 2006


Dear peter

In the last mail i said that b_record is none , so i tried to run the blastall in my local computer and it works right now.

here is the command :
./blastall -d db/swissprot -i /home/manickam/Documents/m_cold.fasta -p blastp 
 and i am getting the result. so let me know if i need to put this command in string and pass this string (example:my_blast_exe). Still i want to know how to pass the input file(my_blast_file).

i think i confuse myself
let me know your view for this
from
manickam




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