[BioPython] Qblast problem

[Omenkeukwu, Gregory]

I am new to Biopython and I am experiencing a little problem. I am running the Blast over the internet example and I keep getting stuck when I invoke the qblast function in NCBIWWW.py. Has anyone ever dealt with the problem below? Every time I run this code I get Invalid literal error for int(). I will appreciate any response thanks.



>>> result_handle = NCBIWWW.qblast('blastn', 'nr', f_record)

Traceback (most recent call last):
  File "<pyshell#9>", line 1, in -toplevel-
    result_handle = NCBIWWW.qblast('blastn', 'nr', f_record)
  File "C:\Python24\Lib\site-packages\Bio\Blast\NCBIWWW.py", line 1092, in qblast
    rid, rtoe = _parse_qblast_ref_page(handle)
  File "C:\Python24\Lib\site-packages\Bio\Blast\NCBIWWW.py", line 1177, in _parse_qblast_ref_page
    return rid, int(rtoe)
ValueError: invalid literal for int(): 1.0 400 We don't support 0.9



Gregory Omenkeukwu
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