[BioPython] NeighborSearch (No module named _CKDTree)
ARTURAS ZIEMYS
ziemys.1 at osu.edu
Mon Jan 9 09:30:26 EST 2006
HI,
I've got a problem with 'NeighborSearch' (python 2.4.2, Biopython 1.41, Windows XP-SP2). I need to find the nearest atoms for my structure, but I can not use 'NeighborSearch'. There something wrong in distribution ?
For example , when I tray to import 'NeighborSearch' in a shell :
IDLE 1.1.2 ==== No Subprocess ====
>>> from Bio.PDB.NeighborSearch import NeighborSearch
Traceback (most recent call last):
File "<pyshell#0>", line 1, in ?
from Bio.PDB.NeighborSearch import NeighborSearch
File "C:\Python24\Lib\site-packages\Bio\PDB\NeighborSearch.py", line 3, in ?
from Bio.KDTree import *
File "C:\Python24\Lib\site-packages\Bio\KDTree\__init__.py", line 10, in ?
from KDTree import KDTree
File "C:\Python24\Lib\site-packages\Bio\KDTree\KDTree.py", line 17, in ?
import CKDTree
File "C:\Python24\Lib\site-packages\Bio\KDTree\CKDTree.py", line 4, in ?
import _CKDTree
ImportError: No module named _CKDTree
>>>
With best
Arturas Z.
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