[BioPython] add models to a structure
thamelry at binf.ku.dk
thamelry at binf.ku.dk
Sat Jul 30 09:08:07 EDT 2005
Hi Ramon,
> I would like to convert two structures created from different PDB
> files through the PDBparser into two models of a new structure. Or
> alternatively, add one of the structures as another model (a new child)
> of the first structute instance.
> Being s1 and s2 structures, I tried:
> s1.add(s2[0])
> but this doesn't work, probably because both model id's are the same
> (=0). How can this model id be changed?
Try model.id=1 for example, before adding the model.
> The question may be very naive, but it is more general. How can I
> convert a group of chains into a new model or a new structure or
> vice-versa?
Well, you can for example do:
s=Structure("Test")
m=Model(0)
s.add(m)
m.add(chain1)
m.add(chain2)
Best regards,
-Thomas
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