[BioPython] Problems with MMCIFlex module

Michiel De Hoon mdehoon at c2b2.columbia.edu
Tue Jul 5 14:40:02 EDT 2005


Yes that would be a problem.

>From your traceback:

>>>from Bio.PDB import *
Traceback (most recent call last):
  File "<input>", line 1, in ?
  File
"/Library/Frameworks/Python.framework/Versions/2.4/lib/python2.4/site-package
s/biopython-1.30/Bio/PDB/__init__.py",
line 13, in ?
....

you can see it is using biopython-1.30 instead of version 1.40b.

Have a look at http://www.biopython.org/docs/install/Installation.html
for the installation instructions, and please let us know if there is still a
problem with Biopython 1.40b.

--Michiel.


Michiel de Hoon
Center for Computational Biology and Bioinformatics
Columbia University
1150 St Nicholas Avenue
New York, NY 10032



-----Original Message-----
From: biopython-bounces at portal.open-bio.org on behalf of Matias Saavedra
Sent: Tue 7/5/2005 2:38 PM
To: biopython at biopython.org
Subject: RE: [BioPython] Problems with MMCIFlex module
 
Yes i used the last version of biopython-1.40b.

But i only decompressed the tar file, and i placed it in a folder within the 
pythonpath. I didnt make install of the file... i don't know if that is the 
problem...

Thanks for helping me

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