[BioPython] writing down a string in fasta format
Jonathan Taylor
jonathan.taylor at utoronto.ca
Thu Feb 10 11:04:21 EST 2005
I believe you need to use Bio.SeqRecord as the input. There really
should be some docstrings in Bio.SeqIO.FASTA.FastaWriter though.
Cheers.
Jon.
Edoardo Saccenti wrote:
> Dear all,
> I'hava a string of length L>>60 and I want write it down in Fasta format
> I try to use FASTA.FastaWriter from BioSeq.IO but it does accept accept a
> string as input.
>
> Any Idea??
>
> thanks
> Edoardo
> --
> "Raffiniert ist der Herr Gott,
> aber boshaft ist Er nicht."
>
> ---
> Dr. Edoardo Saccenti
> FiorGen Pharmacogenomics Foundation
> CERM Nuclear Magnetic Resonace Research Center
> Scientific Pole - University of Florence
> Via Luigi Sacconi n° 6
> 50019 Sesto Fiorentino (FI)
> tel: +39 055 4574193
> fax: +39 055 4574253
> saccenti at cerm.unifi.it
> www.cerm.unifi.it
>
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