[BioPython] Is BioPython thread safe?
Brandon King
kingb at caltech.edu
Thu Oct 21 17:42:58 EDT 2004
Hello All,
Did I not give enough information about the problem? Any one have
any suggestions or ideas?
-Brandon King
Brandon King wrote:
> Hi All,
> I'm trying to use BioPython within a thread of my main program and
> I end up getting this error. Is BioPython intended to be thread safe?
>
> TraceBack:
> <snip>
> from Bio.Blast import NCBIStandalone
> File "/usr/lib/python2.3/site-packages/Bio/__init__.py", line 106, in ?
> _load_registries()
> File "/usr/lib/python2.3/site-packages/Bio/__init__.py", line 98, in
> _load_registries
> module = __import__("Bio.config.%s" % module, {}, {},
> ["Bio","config"])
> File "/usr/lib/python2.3/site-packages/Bio/config/FormatRegistry.py",
> line 26, in ?
> import _support
> File "/usr/lib/python2.3/site-packages/Bio/config/_support.py", line
> 26, in ?
> from Bio.MultiProc.copen import copen_fn
> File "/usr/lib/python2.3/site-packages/Bio/MultiProc/copen.py", line
> 322, in ? signal.signal(signal.SIGTERM, _handle_sigterm)
> ValueError: signal only works in main thread
>
> -Brandon King
>
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