[BioPython] NCBIWWW.blast(): how to get text formatted output
Jeffrey Chang
jchang at jeffchang.com
Mon Sep 22 13:24:28 EDT 2003
On Thursday, September 18, 2003, at 05:43 PM, Peter Maxwell wrote:
> On Friday, September 19, 2003, at 04:15 AM, Frank Kauff wrote:
>> does anybody know which is the correct value for format_type in
>> NCBIWWW.blast() to get a plain text output?
>
> 'Text' , but last time I tried (a long while ago) NCBIWWW.blast() lost
> it somewhere along the way, which one reason why I wrote
> http://www.biolateral.com.au/download/NCBI.py.
Can you double check to see if NCBIWWW.blast was/is losing options? It
would be a pretty serious error, but I cannot see where that might be
happening.
Thanks,
Jeff
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