[BioPython] retrieving fasta records from a Fasta Dictionary

Andrew Nunberg anunberg at oriongenomics.com
Thu Oct 2 15:33:39 EDT 2003


Hi,
I created a fasta index and passed this subroutine in the statement
def get_id(fasta_record):
	id= string.split(fasta_record.title)
	
	return id[0]

when i retreive sequences from the dictionary using 
Fasta.SequenceParser the SeqRecord objects have no id or name, but they 
do have the sequence, is this normal behavior?

Andy
---------------------------------------------------
Andrew Nunberg Ph.D
Bioinfomagician
Orion Genomics
4041 Forest Park
St Louis, MO
314-615-6989
anunberg at oriongenomics.com
www.oriongenomics.com



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