[BioPython] retrieving fasta records from a Fasta Dictionary
Andrew Nunberg
anunberg at oriongenomics.com
Thu Oct 2 15:33:39 EDT 2003
Hi,
I created a fasta index and passed this subroutine in the statement
def get_id(fasta_record):
id= string.split(fasta_record.title)
return id[0]
when i retreive sequences from the dictionary using
Fasta.SequenceParser the SeqRecord objects have no id or name, but they
do have the sequence, is this normal behavior?
Andy
---------------------------------------------------
Andrew Nunberg Ph.D
Bioinfomagician
Orion Genomics
4041 Forest Park
St Louis, MO
314-615-6989
anunberg at oriongenomics.com
www.oriongenomics.com
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