[BioPython] Blast 2.2 or better

Osborne, John jko1 at cdc.gov
Sun Nov 16 20:31:51 EST 2003


Hi,

I just started learning python last week, hoping to use some general
purpose blast parsing code with little effort on my part and I ran into
trouble using the standalone blast parser.  It looks like it was written
for only blast 2.0 about 3 or 4 years ago.  Is this an area that needs
contribution or is there something else I should be using other than
this for fast blast parsing?  I'm using NCBI's 2.2 blast locally.

 

 -John

 



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