[BioPython] Pfam

[Joanne Adamkewicz]

Hi Thomas,

My group at Exelixis has written a module to parse hmmpfam output.
(We're an all-Python shop!)  I don't think we've ever released code
before, but I talked to my department head and he's all for it.  So
we're going to wrap it up with the right headers/docs/declaimers/open
source license or whatever, and I'll post it here.  As to incorporating
the code into BioPython, I'm not clear on the entire process for that,
but would support any efforts to do so (by providing the code in a
standard format, etc).

I'll be in touch, hopefully soon,
Joanne


-----
Joanne Adamkewicz
Informatics Research Scientist
Exelixis Pharmaceuticals, Inc.
www.exelixis.com


----- Original Message -----
From: "Thomas Hamelryck" <thamelry at vub.ac.be>
To: "BioPython Mailing List" <    >
Sent: Tuesday, February 04, 2003 9:53 AM
Subject: [BioPython] Pfam


>
> Hi everybody,
>
> Is anybody working on a Pfam parser for biopython?
>
> Cheers,
>
> ---
> Thomas Hamelryck
> COMO-ULTR
> Vrije Universiteit Brussel (VUB)
> Belgium
> http://homepages.vub.ac.be/~thamelry
>
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>