[BioPython] genbank parser error with new cvs
Richard Llewellyn
rich at mbi.ucla.edu
Wed Dec 3 23:11:27 EST 2003
Hello,
I'm using GenBank to parse plasmid genbank files. Most files are ok
(Biopython providing a great tool), but
a few throw "Martel.Parser.ParserPositionException: error parsing at or
beyond character #". I noticed this issue in the archives, so I
installed the
newest cvs of genbank_format, Record, and Martel.Parser with the
current 1.23
biopython, but to no avail. Are there other relevant modules I should
try?
The problem file is NC_003037, a large plasmid from Sinor. mel.
Thanks for the efforts.
Rich
More information about the BioPython
mailing list