[BioPython] biopython installation problem
James Battey
battey at embl-heidelberg.de
Thu Apr 24 12:36:31 EDT 2003
Hi,
I was wondering if anyone had experience with installing biopython on SGI
machines? I keep getting compiler errors when the setup script tries to
compile Bio/triemodule.c - there were 13 errors in total, a few of which I
have listed below.
#######
cc-1133 cc: ERROR File = Bio/triemodule.c, Line = 532
Expression must be a modifiable lvalue.
((char *)wasread) += bytes_read;
^
cc-1008 cc: ERROR File = Bio/triemodule.c, Line = 605
A new-line character appears inside a string literal.
static char trie__doc__[] = "
^
cc-1065 cc: ERROR File = Bio/triemodule.c, Line = 606
A semicolon is expected at this point.
This module implements a trie data structure. This allows an O(M)\n\
^
cc-1007 cc: ERROR File = Bio/triemodule.c, Line = 606 ......
The indicated token is not valid in this context.
This module implements a trie data structure. This allows an O(M)\n\
^
cc-1007 cc: ERROR File = Bio/triemodule.c, Line = 608
The indicated token is not valid in this context.
string. It also supports approximate matches.\n\
^
#######
Is this likely to be something trivial like incorrect compiler settings?
I'd be greatful for any suggestions.
Cheers,
James.
battey at embl-heidelberg.de
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