[BioPython] InterPro

Jeffrey Chang jchang@SMI.Stanford.EDU
Sat, 21 Jul 2001 09:34:03 -0700 (PDT)


> I found bug 38 when I tried to add code to the Kabat parser to handle
> the case where the third codon in a triplet is left blank.  IThe
> missing base is better represented by a dash.  The new code is a guess
> because it has no way of knowing the position of the missing base
> within the triplet.  The bug is that the new code causes the following
> residue to be skipped.  Should I wait until Andrew or someone looks
> into it before uploading the new parser?

Yes, let's try to fix this first.  However, Andrew is at ISMB right now,
so I don't know when he'll have a chance to look at it.

Jeff