[BioPython] Molecular phylogeny

[Jeffrey Chang]

There's been intermittent talk about doing this, but so far nothing's
showed up yet.  If anyone is working on an implementation that will be
submitted soon, please speak up now!  Otherwise, please be my guest,
Claes.  We've been wanting code for this for a while...

Jeff



On Tue, 17 Apr 2001, Andersson, Claes wrote:

> Hello everybody!
> 
> Since this is my first posting I'd like to thank the biopython people for a 
> great job, it works like a charm.
> 
> However, now I would like to get my hands dirty as well and since one my main 
> bioinformatics interests are molecular phylogeny I'm wondering if there are any 
> phylogeny tools out there for python (Mavric excluded)?
> 
> If not, I'd like to write some code for UPGMA, neighbours relation etc which 
> would fit seamlessly with the biopython suite (are wrappers preferred?). Does 
> this sound like a good idea to anybody? Or has it already been done? If so, 
> where can I find it?
> 
> Once again, thanks
> 
> Claes Andersson
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