[Biopython-dev] [Biopython (old issues only) - Bug #2670] (Closed) Populate seqfeature.display_name

redmine at redmine.open-bio.org redmine at redmine.open-bio.org
Mon Nov 14 23:49:16 UTC 2016

Issue #2670 has been updated by Vincent Davis.

Description updated
Status changed from New to Closed
Assignee changed from Biopython Dev Mailing List to Vincent Davis
% Done changed from 0 to 100

Looks like this has never been done. moved to github.

Bug #2670: Populate seqfeature.display_name

* Author: Peter Cock
* Status: Closed
* Priority: Normal
* Assignee: Vincent Davis
* Category: BioSQL
* Target version: Not Applicable
* URL: 
The seqfeature table has a display_name text field, currently left blank by Biopython's loader, but is populated by BioPerl.  This field is used in GBrowse for example: http://gmod.org/wiki/GBrowse

We could use the protein_id, locus_tag, etc depending on what annotation is available (ideally use the same as BioPerl).

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