[Biopython-dev] Interested in a Phenotype Microarray parser?

Marco Galardini marco at ebi.ac.uk
Fri Jun 3 12:37:55 UTC 2016


Hi all,

let me point out how Peter has been extremely helpful and patient in
smoothing the addition of this module to biopython.

Best,
Marco

On Fri, 2016-06-03 at 12:47 +0100, Peter Cock wrote:
> Hi all,
> 
> I've just merged this based on another revised PR, see:
> https://github.com/biopython/biopython/pull/830
> 
> Thank you Marco for your patience and prompt replies to the
> queries we've raised.
> 
> Let's see if I can get the Biopython 1.67 release done next...
> 
> Peter
> 
> On Thu, Jan 21, 2016 at 4:54 PM, Peter Cock <p.j.a.cock at googlemail.co
> m> wrote:
> > 
> > Hi all,
> > 
> > I've been giving some more technical feedback on this, and the
> > revised pull request looks ready:
> > 
> > https://github.com/biopython/biopython/pull/755
> > 
> > I'd welcome more comments from people more familiar with the
> > area, but given Michael's earlier endorsement if there are no
> > further
> > comments then I'd like to merge this next week?
> > 
> > Thanks,
> > 
> > Peter
> > 
> > 
> > On Thu, Aug 20, 2015 at 2:10 AM, Michiel de Hoon <mjldehoon at yahoo.c
> > om> wrote:
> > > 
> > > Looks good to me. I think we should include it.
> > > Best,
> > > -Michiel.
> > > 
> > > --------------------------------------------
> > > On Wed, 8/19/15, Peter Cock <p.j.a.cock at googlemail.com> wrote:
> > > 
> > >  Subject: Re: [Biopython-dev] Interested in a Phenotype
> > > Microarray parser?
> > >  To: "Marco Galardini" <marco.galardini at unifi.it>, "Michiel de
> > > Hoon" <mjldehoon at yahoo.com>
> > >  Cc: "Biopython-Dev Mailing List" <biopython-dev at lists.open-bio.o
> > > rg>
> > >  Date: Wednesday, August 19, 2015, 11:12 PM
> > > 
> > >  What do you think
> > >  Michiel? You're probably the most appropriate person
> > >  to look at this.
> > > 
> > >  (I've never used Phenotype Microarray
> > >  plates)
> > > 
> > >  Or anyone else?
> > > 
> > >  Peter
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-- 
Marco Galardini
Postdoc, EMBL-EBI
Wellcome Genome Campus
Cambridge, UK



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