[Biopython-dev] Genbank structured comments

[Peter Cock]

On Mon, Oct 26, 2015 at 9:55 PM, Peter Cock <p.j.a.cock at googlemail.com>
wrote:

> On Mon, Sep 14, 2015 at 9:38 AM, Peter Cock <p.j.a.cock at googlemail.com>
> wrote:
> > On Sun, Sep 13, 2015 at 7:00 PM, Brian Osborne <bosborne11 at verizon.net>
> wrote:
> >> All,
> >>
> >> Code done, tests pass. I didn’t hear back about the dict of dict
> approach
> >> but it currently works as in this example:
> >>
> >>         record = SeqIO.read(path.join('GenBank',
> 'KF527485.gbk'),'genbank')
> >>
> >>
> self.assertEqual(record.annotations['structured_comment']['Assembly-Data']['Assembly
> >> Method'], 'Lasergene v. 10')
> >
> > Sounds good :)
>
> This is all done on Brian's pull request:
> https://github.com/biopython/biopython/pull/613
>
> With Biopython 1.66 out of the way, I'd like to merge this - does anyone
> have any feedback/comments?


Changes applied to master, thanks Brian.

TODO: Support for writing structured comments.

Peter
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