[Biopython-dev] Bio.Entrez batch download example with retries

Vincent Davis vincent at vincentdavis.net
Tue Nov 25 15:33:27 UTC 2014


​I am interested, and should have some time this week.​ I'll try to take a
look today and return with questions/guidance. Is there an issue on github
for this?

Vincent Davis
720-301-3003

On Tue, Nov 25, 2014 at 7:56 AM, Peter Cock <p.j.a.cock at googlemail.com>
wrote:

> Hi all,
>
> Would anyone like to contribute an example script using Bio.Entrez
> with try/except handling of intermittent network errors like:
>
>  - HTTP Error 500: Internal Server Error
>  - HTTP Error 502: Bad Gateway
>
> This could be an example under Doc/examples or directly in the
> Entrez chapter in the Tutorial? We can then add an FAQ for dealing
> with network errors in this and other online resources.
>
> See also:
>
>  - https://www.biostars.org/p/65450/
>  - https://www.biostars.org/p/121287/
>
> Thanks,
>
> Peter
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> Biopython-dev at mailman.open-bio.org
> http://mailman.open-bio.org/mailman/listinfo/biopython-dev
>
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