[Biopython-dev] test for affy.CelFile

[Vincent Davis]

On Mon, May 19, 2014 at 6:56 AM, Vincent Davis <vincent at vincentdavis.net>wrote:

> I don't know enough about CEL files to answer this, but is there no easy
>> way to take a subsample of the file? Even zipped this is quite big.
>>
>
> ​Yes, for CEL V3 it is easy and I have found a program that will convert
> between V3 and V4 so I should be able to make a V4 that has the same data.
> I do have a different V4 file also.
>

​I have committed to my branch/fork a small CEL file, modified from
original. In doing so I discovered CEL file line endings are windows style
"\r\n" which Git warns about. more
info​<https://help.github.com/articles/dealing-with-line-endings>.
I committed "as is". Is this going to cause any problems? The file can be
seen here<https://github.com/vincentdavis/biopython/tree/celfile/Tests/Affy>
. "affy_v3_example.CEL"






Vincent Davis
720-301-3003