[Biopython-dev] A biopython buildbot as a docker container
Tiago Antao
tra at popgen.net
Tue Mar 18 18:26:10 UTC 2014
An update on the status:
1. A couple of problems with fasttree and dialign2. These seem
genuine problems with the test code/modules.
2. Prank will wait for ubuntu trusty (it will be a standard package). I
will then include it.
3. I was just able to find part of the fonts for the graphics packages,
so a couple of tests are being skipped
4. naccess as a very restrictive activation system, impossible to add.
1 and 3 are solvable (2 will sort itself out with time). 1 is really a
problem with the biopython code, I think. For 3, if someone could have
a look at the existing fonts here:
https://github.com/tiagoantao/my-containers/blob/master/biopython/Biopython-Basic
And tell me which ones are missing, I would take care of adding them.
Tiago
PS - In the near future I will do a Python 3 container also.
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