[Biopython-dev] OBO parser & DAG

[Iddo Friedberg]

Hi all,

Is there any effort going on for developing the OBO parser & Bio-ontology
DAG? If not, my lab wants to push this. We already have a basic
representation using digraph from networkx, and a basic OBO parser. But i'm
checking to see if there is no duplicate effort here.

All very initial development.

Parser:
https://github.com/idoerg/go-parser

(the relevan module is
https://github.com/idoerg/go-parser/blob/master/go_obo_parser.py


DAG:
https://github.com/osamajomaa/DAGON

Thanks,

Iddo

--

Iddo Friedberg
http://iddo-friedberg.net/contact.html
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