[Biopython-dev] HMMER3.1 beta test 1 released

[Peter Cock]

Hi Bow,

Just FYI, see http://selab.janelia.org/people/eddys/blog/?p=759

"The programs phmmer, hmmsearch, and hmmscan offer a new
tabular output format for easier automated parsing, --pfamtblout.
his format is the one used internally by Pfam, but we make it more
broadly available in case it is of use elsewhere. An analagous
output format is available for nhmmer and nhmmscan, --dfamtblout."

Something to consider for SearchIO later on...

Regards,

Peter