[Biopython-dev] Bio.Motif update

Peter Cock p.j.a.cock at googlemail.com
Tue Jan 29 15:46:25 UTC 2013

On Sun, Jan 27, 2013 at 4:46 AM, Michiel de Hoon <mjldehoon at yahoo.com> wrote:
> OK, thanks! I separated Bio.Motif into Bio.Motif (essentially the same
> as in Biopython release 1.60) and Bio.motifs (the new code).

We need to say something about this in the NEWS file too.

I think it would make sense to add a PendingDeprecationWarning
to Bio.Motif now. Also, if you feel the new Bio.motifs API isn't quite
settled yet, adding the new BiopythonExperimentalWarning to that
makes sense.

What do you think?

(And once this is settled, I think we can schedule the release)



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