[Biopython-dev] More 'fun' with GenBank

Kai Blin kai.blin at biotech.uni-tuebingen.de
Mon Jan 21 09:49:31 UTC 2013


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On 2013-01-20 20:03, Peter Cock wrote:

> Kai - would you mind retesting with f_loc5 (the rebased branch)?

The location of the feature that caused trouble for me still looks
correct. I'm currently running some more sequences, but I'm pretty
confident that the code will work just fine. The tests I added to the
genbank parser code for all the problem cases I had pass, after all. :)

> Everyone - does it seem sensible to include this now, ready for the
> upcoming release (*)? Or perhaps just after the release?

I'd perfer having this in the next release if possible, but of course
if the release after that is coming up within a reasonable time frame,
that would work as well.

Cheers,
Kai

- -- 
Dipl.-Inform. Kai Blin         kai.blin at biotech.uni-tuebingen.de
Institute for Microbiology and Infection Medicine
Division of Microbiology/Biotechnology
Eberhard-Karls-Universität Tübingen
Auf der Morgenstelle 28                 Phone : ++49 7071 29-78841
D-72076 Tübingen                        Fax :   ++49 7071 29-5979
Germany
Homepage: http://www.mikrobio.uni-tuebingen.de/ag_wohlleben
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