[Biopython-dev] Fwd: [biopython] Fix Biopython installation with pip (#172)

[Brad Chapman]

Kai;
Thanks for testing this out. For your failures on 12.04 and 12.10:

- What version of pip are you using? (pip --version)
- Is it failing during the install process, or at some other point?

I'll work on reproducing this here. Thanks again,
Brad

> On 2013-04-11 12:17, Peter Cock wrote:
>
> Hi folks,
>
>>> Sure, I've got a zoo of Ubuntu systems to try this on, and I'd actually be
>>> very interested in this. I'll give it a go.
>>
>> A whole zoo of Ubuntu systems? Sounds like an excellent test set :)
>>
>
> So, my tests were run like this:
>
> - set up an Ubuntu server install of the given version.
> - installed build-essential python-dev git-core python-virtualenv
> - ran:
> $ git clone git://github.com/chapmanb/biopython.git
> $ virtualenv test
> $ source test/bin/activate
> $ pushd biopython
> $ pip install .
> $ popd
> $ python -c "import Bio; print Bio.__version__"
>
> Current results are:
> 10.04: works great
> 12.04: fails, telling me that numpy is required
> 12.10: fails, telling me that numpy is required
>
> Cheers,
> Kai
>
> -- 
> Dipl.-Inform. Kai Blin         kai.blin at biotech.uni-tuebingen.de
> Institute for Microbiology and Infection Medicine
> Division of Microbiology/Biotechnology
> Eberhard-Karls-Universität Tübingen
> Auf der Morgenstelle 28                 Phone : ++49 7071 29-78841
> D-72076 Tübingen                        Fax :   ++49 7071 29-5979
> Germany
> Homepage: http://www.mikrobio.uni-tuebingen.de/ag_wohlleben
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