[Biopython-dev] Biopython tutorial: Substitution Matrices

[Brad Chapman]

Grace and Peter;

[Different log odds matrix in documentation]

> However, that was just a reformatting of an older example which
> Brad wrote 11 years ago while converting the example from DNA
> to protein:

Gee, thanks for making me feel old.

> So, since the example hasn't been changed in 11 years, this
> suggests either Brad committed the wrong output (and no-one
> noticed), or something changed in the calculation during that
> time.

Seriously, I could have easily copy/pasted something wrong when writing
this, so if there is no obvious code change I'd go with that assumption
and fix the docs to be correct.

Thanks for spotting this,
Brad