[Biopython-dev] Biopython tutorial: Substitution Matrices

Brad Chapman chapmanb at 50mail.com
Fri Sep 28 09:51:36 UTC 2012

Grace and Peter;

[Different log odds matrix in documentation]

> However, that was just a reformatting of an older example which
> Brad wrote 11 years ago while converting the example from DNA
> to protein:

Gee, thanks for making me feel old.

> So, since the example hasn't been changed in 11 years, this
> suggests either Brad committed the wrong output (and no-one
> noticed), or something changed in the calculation during that
> time.

Seriously, I could have easily copy/pasted something wrong when writing
this, so if there is no obvious code change I'd go with that assumption
and fix the docs to be correct.

Thanks for spotting this,

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