[Biopython-dev] json formatting of SeqRecord objects
Alex Leach
albl500 at york.ac.uk
Thu May 24 11:06:45 UTC 2012
Dear all,
I've written a fairly simple SeqRecord formatter to convert sequences to/from
JSON objects, and wondered if it might be useful enough to be included in
BioPython.
It currently injects 'json' into SeqIO and AlignIO's _FormatToIterator and
_FormatToWriter dictionaries, so can be used like any other SeqRecord format.
I'm not sure where exactly I should submit it, but I thought here might do as
an initial proposal..
I attach the source code. If you'd be interested in using it, let me know and
I'll tidy it up to standards.
Kind regards,
Alex
--
Alex Leach BSc. MRes.
Department of Biology
University of York
York YO10 5DD
United Kingdom
EMAIL DISCLAIMER: http://www.york.ac.uk/docs/disclaimer/email.htm
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